|Year : 2017 | Volume
| Issue : 1 | Page : 11-15
Prevalence and profile of pulmonary fungal pathogens among HIV-infected patients attending University of Maiduguri Teaching Hospital, Nigeria
Muhammad Talle1, Ibrahim M Hamidu2, Idris-Abdullahi Nasir MSc 3, Abubakar Mursal4, Kalama B Dikwa4, Mustapha Jelili5, Peter O Musa6
1 Department of Medical Laboratory Science, College of Medical Sciences, University of Maiduguri, Maiduguri, Nigeria
2 Department of Clinical Immunology and Infectious Diseases, University of Maiduguri Teaching Hospital, Maiduguri, Nigeria
3 Department of Medical Laboratory Services, University of Abuja Tecahing Hospital, Gwagwalada, Nigeria
4 Department of Medical Microbiology and Parasitology, University of Maiduguri Teaching Hospital, Maiduguri, Nigeria
5 Department of Medical Microbiology and Parasitology, Lagos State University Teaching Hospital, Ikeja, Nigeria
6 Department of Medicine (Immunology Unit), Ahmadu bello University, Zaria, Nigeria
|Date of Submission||13-Feb-2017|
|Date of Acceptance||22-Feb-2017|
|Date of Web Publication||12-Jun-2017|
Department of Medical Laboratory Services, University of Abuja Teaching Hospital, PMB 228 Gwagwalada, FCT Abuja
Source of Support: None, Conflict of Interest: None
Fungal infections in lungs are being diagnosed with increasing frequency. This is related to the increased immunocompromised status and hygienic factors among patients. In view of this, the present study sought to isolate, identify, and determine the prevalence of pathogenic fungi in HIV-infected patients attending the University of Maiduguri Teaching Hospital, Nigeria.
Materials and methods
Between 5 April 2016 and 27 August 2016, three consecutive sputum samples in the early morning were collected from individual participants. The samples were inoculated onto Petri dishes containing sabouraud dextrose agar in triplicates for isolation. The fungal isolates were identified using standard mycological stains and reagents. Self-administered questionnaires and participants’ hospital cards were used to assess demographic and clinical variables, respectively.
The prevalence of pulmonary fungal infection among the patients was at 68%. Of the infected patients, male patients accounted for 59.8%, whereas female patients accounted for 40.1%. However, there was no significant association between the prevalence of pulmonary fungal infection and sex of subjects (P=0.630). Candida albicans [24 (23.5%)] accounted for the highest proportion of the fungal isolates, followed by Aspergillus spp. [19 (18.6%)], with the least being Torulopsis dattila [one (0.9%)], Torulopsis glabrata, [one (0.9%)], and Microsporum canis [one (0.9%)]. Subjects with ages between 31 and 35 years that the highest prevalence of pulmonary fungal infections, 28 (27.5%), whereas those between 56 and 60 years, had the least prevalence, 1 (20.0%). Among the 102 participants coinfected with HIV/tuberculosis (TB), 92 (90.2%) had fungal coinfections, representing a relatively higher prevalence compared with those without TB, 10 (20.8%). There was statistical association between the prevalence of pulmonary fungal infections and TB status and age of patients (P<0.05).
Findings from this study revealed a high prevalence of pulmonary fungi in HIV/TB coinfected patients, with C. albicans being the leading causal fungi responsible for symptoms of pulmonary diseases.
Keywords: coinfections, immunosuppression, mycosis, opportunistic infections
|How to cite this article:|
Talle M, Hamidu IM, Nasir IA, Mursal A, Dikwa KB, Jelili M, Musa PO. Prevalence and profile of pulmonary fungal pathogens among HIV-infected patients attending University of Maiduguri Teaching Hospital, Nigeria. Egypt J Intern Med 2017;29:11-5
|How to cite this URL:|
Talle M, Hamidu IM, Nasir IA, Mursal A, Dikwa KB, Jelili M, Musa PO. Prevalence and profile of pulmonary fungal pathogens among HIV-infected patients attending University of Maiduguri Teaching Hospital, Nigeria. Egypt J Intern Med [serial online] 2017 [cited 2018 Feb 21];29:11-5. Available from: http://www.esim.eg.net/text.asp?2017/29/1/11/207781
| Introduction|| |
Fungal respiratory infections are important causes of mortality and morbidity among HIV-positive individuals. They account for up to 70% of illness in AIDS cases . The range of illness varies from asymptomatic mucosal candidiasis to overwhelming disseminated infections. In these patients, dissemination of fungus leads to very serious outcomes, hence it is important to have the knowledge of prevailing profile of fungi that cause infections, so that they can be treated at the onset . Fungal infections in the lungs are being diagnosed with increasing frequency. This is related to the increased immunocompromised and other susceptible patient groups. Heightened awareness of fungal lung infection and appropriate use of the available diagnostic modalities permit appropriate treatment of these important clinical infections in immunocompromised individuals . Very few of these fungi are capable of causing infection in a normal host. Vast progress has been achieved in the understanding of fungal pathogenicity, including the mechanism of adherence to the host tissue, penetration of the tissue, multiplication within the host, and the interaction of fungal cells with host effector cells .
In addition to the increase in the infection rates in immuocompromised patients by opportunistic and pathogenic fungi, such as Candida spp., Aspergillus spp., Cryptococcus neoformans, Histoplasma capsulation, and Coccidioides immitis, many fungi that occur as saprophytes in the environment and which had previously been considered to be nonpathogenic are now being encountered as a causal agent in human infections . The advent of these unusual infections has led to reappraisal of the diagnostic test involved in the investigation of fungal infections and has had important implications for the choice of treatment. Many of these fungi have a similar tissue appearance, and the organism must be isolated and identified to ensure that the most appropriate treatment is given .
The incidence of invasive fungal infections has increased considerably in recent years because of the increase in population having HIV infection ,. Survival of patient from such life-threatening infections depends on early diagnosis, but clinical manifestations of invasive fungal infections are nonspecific and laboratory methods are often unable to diagnose the infections in its early stages . In view of these, the present study sought to isolate, identify, and determine the prevalence rate of pathogenic fungi in HIV-infected patients attending the University of Maiduguri Teaching Hospital, Nigeria.
| Patients and methods|| |
The prospective study was conducted at the HIV/AIDS special clinic of the University of Maiduguri Teaching Hospital, Borno State, Nigeria. Maiduguri, the capital city of Borno State, is situated at the North-East of Nigeria sharing borders with neighboring countries such as Niger Republic, Chad, and Cameroon. It also shares borders with neighboring states such as Adamawa, Yobe, and Gombe states. This city is in the Sahel savannah with high temperature of over 39°C for almost 7 months of the year and very little rainfall.
Procedure for fungal identification
Potassium hydroxide (KOH) wet mount: a clean grease-free glass slide was taken, and a large drop of KOH solution was placed on the slide with a Pasteur pipette. Small quantity of the specimen was transferred with a loop into the KOH drop. A clean coverslip was then placed over the preparation gently to avoid air bubble. The slide was kept in a moist chamber at room temperature for 15 min and then observed under ×10 and ×40 objectives .
Lactophenol cotton blue staining (needle mounts preparation): a drop of lactophenol cotton blue stain was placed on a clean grease-free glass slide. A small fragment of cottony, woolly, or powdery colony was picked from the midpoint of the culture using a sterile straight wire and placed on clean glass slides for the staining process. A clean coverslip was applied avoiding air bubbles. Excess stain was removed with blotting paper and the preparation was examined using ×10 and ×40 objectives of the microscope. Microconidia, macroconidia, chlamydospores, and hyphae that appeared spiral, pertinate, and antler-like structures were investigated. Features seen in stained slide were compared with established characteristic fungal features using mycology Atlas More Detailses ,.
Indian ink preparation: this stain was used to identify C. neoformans. The preparation was made in the center of a clean grease-free glass slide. A drop of the ink was placed on the slide, and a loopful of the specimen was placed close to the drop and mixed well. A coverslip was held vertically such that one edge just touches the fluid on the slide. Keeping that edge in contact with the fluid surface, the coverslip was gently dropped on the fluid so that air bubble was not trapped. Thereafter, immediate microscopic examination followed ,.
Germ tube test: this test was used for the identification of Candida albicans from other species. Approximately 0.5 ml of sterile human serum was dispensed into a test tube using a sterile wire loop; the serum was lightly inoculated with the test organism. The test tube was then incubated at 37°C for 2–3 h, after which a drop of the serum yeast culture was transferred to a clean grease-free glass slide and covered with a coverslip. It was then examined microscopically using ×10 and ×40 objectives with the diaphragm closed sufficiently to give a good contrast. Sprouting or tube-like outgrowth from the cells indicates that the organism is C. albicans ,.
The results from self-administered questionnaire and mycology results were analyzed using Statistical Package for Social Sciences (SPSS Version 21, IBM California Inc., USA) for χ2-test. P values of less than 0.05 were considered statistical significant for comparison between demographic variables and prevalence of fungi from HIV-infected patients.
| Results|| |
Of the 150 sputum samples analyzed, 102 (68%) were positive for fungal infection ([Figure 1]). Of the infected patients, males accounted for 61 (59.8%), whereas females accounted for 41 (40.1%). Consequently, the prevalence of pathogenic fungi was higher in male than in female patients ([Table 1]). However, there was no significant association between the prevalence of pulmonary fungal infection and sex of patients (P=0.630). The distribution of the pathogenic fungi in the infected population reveals that C. albicans [24 (23.5%)] accounted for the highest proportion of the isolates, followed by Aspergillus spp. [19 (18.6%)], and the least were Torulopsis dattila [one (0.9%)], Torulopsis glabrata [one (0.9%)], and Microsporum canis [one (0.9%)] ([Table 2]). The study revealed that in the age group between 31 and 35 years, 28 (27.5%) had pulmonary fungal infection, representing the highest prevalence, whereas in those between 56 and 60 years, one (20.0%) had pulmonary fungal infection, representing the least prevalence ([Table 3]). There was statistical association between the prevalence of pulmonary fungal infections and age of patients (P=0.033). Overall, 92 (90.2%) persons infected with HIV along with tuberculosis (TB) had pulmonary fungal infection, which represents a relatively higher prevalence compared with those without TB, 10 (20.8%) (P=0.00) ([Table 4] and [Table 5]).
|Table 2 Frequency of occurrence of pathological fungi among the positive culture samples|
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|Table 4 Prevalence of pulmonary fungi and tuberculosis coinfection among HIV-infected patients|
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|Table 5 Distribution of pathogenic fungi among positive patients with and without tuberculosis|
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| Discussion|| |
HIV-infected persons often have weak immune function, hence opportunistic pulmonary fungal infections are expected. This present study reported a higher prevalence of pulmonary fungi at 68% in HIV-infected persons attending UMTH. This is higher to the prevalence reported in Kano and Calabar by Taura et al.  and Ogbaa et al. , respectively, and also higher than the prevalence report by Shailaja et al. , Diaz-Fuentes et al.  reported a prevalence of 41% in HIV-positive patients on autopsy in New York. The high prevalence rate recorded in the present study could reflect the fact that three consecutive spontaneous sputum samples in the early morning were collected from each patient and processed immediately after collection, so that pathogens were not lost in the process of preservation. It could also be associated with the inadequate medical care of HIV-infected persons in Maiduguri owing to sociopolitical unrest the region experiences along with nutritional and hygienic factors.
Candida spp. globally remain the most frequently implicated opportunistic fungal pathogens in HIV/AIDS infection , probably because they are endogenous opportunists, and they were also the most prevalent fungal agent in our study, occurring in 16.0% of HIV-positive patients. These results are in agreement with the 11.8% reported by a study in Calabar , 19.0% by Aluyi et al., and the 12.1% prevalence reported in India  but considerably lower than that reported in New York by Diaz-Fuentes et al. , which is 48%. However, in the New York study, Candida spp. was isolated from lung tissue at autopsy; this is a definitive diagnostic technique for pulmonary candidiasis, and it is likely that none of their isolates were lost.
In the present study, no autopsy was carried out if a participant died, so we were not able to confirm what infection was present. C. albicans was the species most commonly identified in our study, followed in descending order of prevalence by Aspergillus spp., Mucor spp., and C. neoformans. The variation in the aforementioned finding perhaps reflects variation in the geographical distribution of different Candida spp.
Regarding sex of the patients, male (69.3%) patients were found to have relatively higher prevalence of pulmonary fungi than the female (66.1%). When analyzed statistically, the association was found to be nonsignificant, which means that fungal infection does not correspond to sex. This correlates with previous finding , which reported that sex did not show any independent risk for developing pulmonary biopsies regarding fungal infection.
Pulmonary mycoses occur in all age groups as shown in the study; however, age group 31–35 years was found to have the highest prevalence (83.1%), whereas age group 56–60 years had the lowest (20.0%). When analyzed statistically, age distribution was found to be significant (P<0.05), which indicate that it is age related. This agrees with the findings of Aluyi et al.  in the analysis of pulmonary mycoses in patients with AIDS according to age groups in which they found out that nine species of fungi were isolated within ages 21–30 and eight organisms from 40–50 age groups and three organisms isolated from below 20 and above 50 age brackets (21–45 years). Possible reason for high prevalence could be that young adults mostly engage in outdoor activities where they could have been exposed to the airborne form of these fungi. The lower prevalence among ages between 51 and 60 years could be because very few individuals participated in this study.
Findings from this study revealed that patients with HIV/TB coinfections had relatively higher and significant prevalence of pulmonary fungal infections. In the present study, we reported a 90.2% prevalence of opportunistic fungal infections in HIV/TB coinfected patients. This value is higher than those reported by Taura et al.  and Yadu et al. . Apart from the ideal opportunistic relationship between fungus and TB infections of the lungs, HIV infection also provides ideal immunosuppression that allows these fungi to thrive favorably .
Conclusion: Findings from this study revealed a high prevalence of pulmonary fungi HIV/TB coinfection, with C. albicans being the leading causal fungi responsible for symptoms of pulmonary diseases, followed by saprophytic and airborne fungi. A more detailed longitudinal (cohort) study may help formalize the use of CD4+ T cell count as an indicator of HIV/AIDS with opportunistic mycoses and form an appropriate point for prophylactic and therapeutic measures in a resource-limited setting.
We appreciate the patients for allowing them to use their samples for this study. They wish to show their profound gratitude to the staff of medical microbiology laboratory and HIV Special Clinic (PEPFAR) for their technical and logistic support.
Financial support and sponsorship
Conflicts of interest
There are no conflicts of interest.
| References|| |
Chandwani J, Vyas N, Hooja S, Sharma B, Maheshwari R. Mycological profile of sputum of HIV positive patients with lower respiratory tract infection and its correlation with CD4+ T lymphocyte count. J Clin Diagn Res 2016; 10:DC28–DC31.
Limper AH. The changing spectrum of fungal infections in pulmonary and critical care practice: clinical approach to diagnosis. Proc Am Thorac Soc 2010; 7:163–168.
Richardson MD. Opportunistic and pathogenic fungi. J Antimicrob Chemother 1991; 28(Suppl A):1–11.
Ambasta A, Carson J, Church DL. The use of biomarkers and molecular methods for the earlier diagnosis of invasive Aspergillosis in immunocompromised patients. Med Mycol 2015; 53:531–557.
Badiee P, Kordbacheh P, Alborzi A, Malekhoseini S, Ramzi M, Mirhendi H et al.
Study on invasive fungal infections in immunocompromised patients to present a suitable early diagnostic procedure. Int J Infect Dis 2009; 13:97–102.
Azab MM, Abo Taleb AF, Mohamed NAE, Omran FH. 2015 Rapid diagnosis of invasive fungal infections. Int J Curr Microbiol App Sci 2015; 4:470–486.
Ellis D, Davis S, Alexiou H, Handke R, Bartley R Description of medical fungi. North Adelaide, USA: Mycology Unit, Women’s and Children’s Hospital; 2007.
Ochie J, Kolhatkhar A. Laboratory techniques in mycology examination of sputum. Medical Laboratory Science, Theory and Practice. New Delhi, India: Tata McGraw Hill Publishing Co. Ltd; 2005. pp.105–33.
Taura DW, Adamu S, Koki YA, Musa MA, Muhammad BB. Mycotic infections associated with pulmonary symptoms in patients attending Infectious Diseases Hospital, Kano. Greener J Microbiol Antimicrob 2014; 2:015–020.
Ogba OM, Abia-Bassey LN, Epoke J. The relationship between opportunistic pulmonary fungal infections and CD4 count levels among HIV-seropositive patients in Calabar, Nigeria. Trans R Soc Trop Med Hyg 2013; 107:170–175.
Shailaja LA, Pai LA, Mathur DR, Lakshmi V. Prevalence of bacterial and fungal agents causing lower respiratory tract infections in patients with HIV infection. Indian J Med Microbiol 2004; 22:28–33.
Diaz-Fuentes G, Shin C, Sy E, Niazi M, Menon L. Pulmonary fungal involvement in HIV-positive patients in an inner city hospital in New York. Internet J Pulmonary Med 2007; 7:1–6.
Eza D, Cerrillo G, Moore DA. Postmortem findings and opportunistic infections in HIV positive patients from a public hospital in Peru. Pathol Res Prac 2006; 202:767–775.
Aluyi HSA, Otajevwo FD, Iweriebor O. Incidence of pulmonary mycoses in patients with acquired immunodeficiency diseases. Niger J Clin Prac 2010; 13:78–83.
Mustapha E, Antoni T, Fabregas N, Jorge OB. Significance of the isolation of Candida species from respiratory samples of critically ill patients. Am J Resp Crit Care Med. 1997; 156:583–590.
Yadu R, Nawange SR, Singh SM, Gutch RS, Gumasta R, Nawange M, Kavishwar A. Prevalence of opportunistic fungal infection in patients with pulmonary tuberculosis in Madhya Pradesh, Central India. J Microbiol Biomed Res 2015; 1:1–12.
[Table 1], [Table 2], [Table 3], [Table 4], [Table 5]